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LightGBM-Based Detection and Prevention of Unauthorized Pipeline Configuration Modification Attacks in GitLab CI CD Using YAML Change Analysis and Integrity Verification

Description

GitLab CI/CD is used to automate software building, testing, and deployment through pipeline configurations. The .gitlab-ci.yml file defines pipeline stages, jobs, commands, execution conditions, and security checks that control the software delivery workflow.

The pipeline configuration must be protected because unauthorized modifications can change job commands, remove security checks, alter execution conditions, or introduce unexpected operations into the software development process.

If an attacker gains unauthorized access to a GitLab repository or an account with excessive permissions, the attacker may modify pipeline configurations and introduce changes that weaken security controls or affect software build integrity.

In this use case, GitLab Community Edition is deployed in an isolated Ubuntu virtual machine using VirtualBox. A controlled Git repository maintains the approved .gitlab-ci.yml configuration, while Kali Linux is used as the security-testing environment.

A public cybersecurity dataset is collected and used to train and evaluate a LightGBM machine-learning model. The dataset is preprocessed, relevant features are selected, and the data is divided into training and testing sets. Dataset features and labels are verified to ensure they support the intended classification task.

Python and PyYAML are used to analyse pipeline configuration files and extract structured features from configuration changes. Git is used to compare approved and modified configurations, while SHA-256 integrity verification identifies differences between the trusted baseline and the current configuration.

LightGBM classifies compatible configuration-change features to identify suspicious modification patterns. Controlled unauthorized configuration changes are introduced in the laboratory to assess the detection workflow. Security rules and supplementary scanning tools provide additional evidence for validating suspicious findings.

GitLab project controls, including protected branches and merge-request approvals where supported, are configured to restrict unapproved changes. The configuration is then corrected or restored, and the assessment is repeated to verify that the intended security controls operate correctly.

The complete security-validation workflow is:
GitLab CI/CD Pipeline
→
.gitlab-ci.yml Configuration
→
Public Dataset Collection
→
Dataset Preprocessing
→
Feature Engineering
→
LightGBM Model Training and Evaluation
→
Configuration Change Analysis
→
Suspicious Change Detection
→
SHA-256 Integrity Verification
→
Security Finding Validation
→
Risk Prioritization
→
Pipeline Access Restriction
→
Configuration Remediation
→
Post-Remediation Validation

Existing Security Problem

Application/Service: GitLab CI/CD Pipeline

GitLab CI/CD is the target software delivery service in this use case.

It manages repositories, pipeline configurations, automated jobs, and software build and deployment workflows.

Existing Problem :

The .gitlab-ci.yml file controls how pipeline jobs execute and which commands, stages, and conditions are applied during software delivery.

If an unauthorized user modifies this configuration, the changes may introduce unexpected commands, remove security-check stages, alter job execution conditions, or weaken the intended pipeline controls.

Basic YAML validation can determine whether a configuration file is syntactically valid, but it cannot independently determine whether every change is authorized or secure.

File-integrity checks can identify differences from a trusted baseline, but a hash mismatch alone cannot establish whether the change is malicious. Similarly, static-analysis tools identify supported security weaknesses but may not detect every unauthorized configuration modification.

The security problem is:
GitLab CI/CD Pipeline
→
.gitlab-ci.yml Configuration
→
Unauthorized Configuration Modification
→
Unexpected Pipeline Changes
→
Security Checks or Job Rules Altered
→
Potential Software Delivery Risk
→
Configuration Detection and Validation

The proposed solution introduces public dataset-based LightGBM model training, pipeline configuration-change analysis, YAML feature extraction, SHA-256 integrity verification, security finding validation, risk prioritization, pipeline access restrictions, and post-remediation validation.

Attack

Specific Attack: Unauthorized GitLab CI/CD Pipeline Configuration Modification Attack

The controlled attack scenario evaluates whether suspicious or unauthorized modifications to the GitLab .gitlab-ci.yml configuration can be identified before the affected pipeline proceeds.

The approved configuration is maintained in Git as the trusted baseline. Controlled changes are introduced in the isolated laboratory to represent unexpected job-command modifications, removal of configured security checks, or changes to pipeline execution conditions.

The public cybersecurity dataset is used to train and evaluate the LightGBM model. The controlled GitLab configuration changes are then used to assess the target application's detection workflow. The extracted configuration features must be compatible with the model's training features for its predictions to be meaningful.

Git change analysis identifies the modified configuration elements. PyYAML parses the configuration, and LightGBM classifies the extracted features. SHA-256 integrity verification identifies differences from the trusted baseline, while security rules provide additional evidence for reviewing the findings.

The objective is to determine whether suspicious configuration changes can be detected, investigated, and prevented from proceeding through the protected pipeline workflow.

The assessment is performed only in the authorized laboratory using controlled changes. No production pipeline or external system is targeted.

Attack Behavior :
Controlled Unauthorized Modification
→
GitLab Pipeline Configuration
→
.gitlab-ci.yml File Changed
→
Git Change and YAML Analysis
→
Feature Extraction
→
LightGBM Change Classification
→
SHA-256 Integrity Verification
→
Security Finding Validation
→
Pipeline Access Restriction
→
Configuration Remediation
→
Post-Remediation Validation

Security Concept

Machine Learning-Based Pipeline Configuration Analysis and Integrity Verification

The primary security concept combines LightGBM-based classification with pipeline configuration-change analysis and file-integrity verification.

A suitable public cybersecurity dataset is collected, inspected, and preprocessed to prepare labelled records for model training and evaluation. Relevant features are selected, and the dataset is divided into training and testing sets.

LightGBM learns patterns from the training data and classifies feature records according to the labels available in that dataset. Python and PyYAML analyse the GitLab pipeline configuration and extract compatible features from its changes. The dataset's suitability and the relationship between training features and GitLab configuration features must be verified before the model is applied to the target application.

SHA-256 integrity verification identifies differences between the current .gitlab-ci.yml file and its trusted baseline. Git provides change history, while security rules and supplementary scanners help validate the findings. A model prediction or hash mismatch alone is not treated as proof of malicious activity.

The defensive workflow is:

Public Dataset Collection

↓

Dataset Preprocessing

↓

Feature Engineering

↓

Training and Testing Data Split

↓

LightGBM Model Training and Evaluation

↓

GitLab Configuration Collection

↓

Git Change and YAML Analysis

↓

Configuration Feature Extraction

↓

LightGBM Change Classification

↓

SHA-256 Integrity Verification

↓

Security Finding Validation

↓

Risk Assessment

↓

Pipeline Access Restriction

↓

Configuration Remediation

↓

Post-Remediation Validation

Defensive Mechanism

The security concept defines the overall security strategy.

The following are the specific defensive mechanisms implemented.

Public Dataset-Based Model Training :

A suitable public cybersecurity dataset is collected, preprocessed, and used to train and evaluate the LightGBM model.

Purpose: Train and evaluate the model using relevant labelled security data.

Dataset Feature Engineering

Relevant dataset features are selected and transformed into a consistent representation for model training.

Purpose
  • Prepare suitable model inputs and maintain compatibility with configuration-analysis features.

GitLab Pipeline Configuration Review

Approved and modified .gitlab-ci.yml configurations are compared to identify unexpected changes to jobs, commands, stages, and execution rules.

Purpose
  • Identify unauthorized modifications to pipeline configuration.

YAML Configuration Analysis

PyYAML parses the pipeline configuration and extracts structured features for security analysis.

Purpose
  • Convert pipeline configuration changes into structured data for assessment.

LightGBM-Based Change Classification

The trained model classifies compatible configuration-change features according to the patterns learned from the dataset.

Purpose
  • Identify suspicious configuration-change patterns requiring further investigation.

SHA-256 Integrity Verification

The current pipeline configuration hash is compared with the hash of the trusted baseline.

Purpose
  • Detect changes to the approved pipeline configuration.

Git History and Change Analysis

Git history and diff information are reviewed to identify the exact configuration elements that have changed.

Purpose
  • Provide traceable evidence of pipeline configuration modifications.

Security Rule Validation

Relevant security rules and supplementary scanning tools are used to investigate suspicious changes and supported security weaknesses.

Purpose
  • Validate findings and provide additional security evidence.

Pipeline Access Control

Protected branches, merge-request approvals, and appropriate pipeline restrictions are configured where supported.

Purpose
  • Prevent unapproved configuration changes from proceeding through the protected workflow.

Post-Remediation Validation

The corrected configuration is analysed again, and integrity checks and relevant security tests are repeated.

Purpose
  • Verify that suspicious changes have been addressed and legitimate pipeline operations remain functional.

Security Tools

Machine Learning Algorithm: LightGBM

LightGBM is the primary machine-learning algorithm used to classify structured feature records from the prepared training dataset and configuration-analysis workflow.

Purpose
  • Train a model using the prepared training data.
  • Classify compatible configuration-change features.
  • Evaluate predictions using appropriate classification metrics.
  • Support suspicious-change assessment.
  • Record false positives and false negatives.

Dataset Processing Tool: Pandas and NumPy

Pandas and NumPy are used to load, inspect, clean, and transform the public cybersecurity dataset.

Purpose
  • Load and inspect dataset records.
  • Handle missing and invalid values.
  • Prepare numerical and categorical features.
  • Support feature engineering.
  • Prepare data for model training.

Model Evaluation Tool: scikit-learn

scikit-learn supports dataset splitting and model evaluation.

Purpose
  • Split the dataset into training and testing sets.
  • Calculate precision, recall, and F1-score.
  • Generate a confusion matrix where appropriate.
  • Assess false positives and false negatives.
  • Support reproducible model evaluation.

Pipeline Configuration Parser: PyYAML

PyYAML parses the GitLab .gitlab-ci.yml configuration into structured Python data for analysis.

Purpose
  • Read supported YAML configuration files.
  • Extract relevant jobs, stages, commands, and settings.
  • Support configuration feature extraction.
  • Compare structured configuration elements.
  • Prepare compatible model inputs.

Version Control Tool: Git

Git maintains the pipeline configuration history and identifies changes between approved and modified versions.

Purpose
  • Maintain the trusted configuration baseline.
  • Identify modified configuration elements.
  • Preserve change history.
  • Support investigation and remediation.
  • Validate the corrected configuration.

File Integrity Verification Tool: Python hashlib SHA-256

Python hashlib generates SHA-256 hashes for the approved and current pipeline configurations.

Purpose
  • Generate the trusted baseline hash.
  • Calculate the current configuration hash.
  • Identify file-content differences.
  • Support integrity verification.
  • Preserve integrity-check evidence.

Application Security Testing Tool: Semgrep CE

Semgrep CE performs supported static-analysis checks on relevant source files and configurations.

Purpose
  • Identify supported security patterns.
  • Provide supplementary security findings.
  • Support configuration and code review.
  • Help validate potential security weaknesses

Vulnerability and Configuration Assessment Tool: Trivy

Trivy scans supported container images and configuration files for known vulnerabilities and supported security issues.

Purpose
  • Identify known vulnerabilities in relevant container images.
  • Check supported configuration files.
  • Provide additional security findings.
  • Support risk assessment.

Target CI/CD Platform: GitLab Community Edition

GitLab Community Edition provides the repository, CI/CD pipeline, merge-request workflow, and project controls being assessed.

Purpose
  • Maintain the .gitlab-ci.yml configuration.
  • Execute controlled pipeline tests.
  • Manage repository changes.
  • Configure suitable access restrictions.
  • Validate the pipeline after remediation.

Dashboard Development Tool: Streamlit

Streamlit provides a Python-based dashboard for displaying model predictions and configuration-security assessment results.

Purpose
  • Display suspicious-change classifications.
  • Show configuration-integrity status.
  • Present model evaluation metrics.
  • Display relevant security findings.
  • Support review of assessment evidence.

Container Runtime: Docker Engine

Docker Engine provides container execution where required for the GitLab laboratory deployment and related test components.

Purpose
  • Support isolated service deployment.
  • Run required containerized components.
  • Provide controlled laboratory services.
  • Support repeatable testing.

Target Platform: Ubuntu Linux

Ubuntu provides the primary environment for GitLab, Python, dataset processing, model training, and security analysis.

Purpose
  • Host the target CI/CD environment.
  • Run dataset preprocessing and model training.
  • Execute configuration-analysis components.
  • Support security validation.
  • Apply configuration and access-control changes.

Security Testing Platform: Kali Linux

Kali Linux provides the controlled security-testing environment for the authorized laboratory.

Purpose
  • Perform permitted laboratory security testing.
  • Validate connectivity to the target environment
  • Support service and configuration assessment.
  • Assist with post-remediation testing.

Virtualization Platform: VirtualBox

VirtualBox provides the isolated virtual-machine infrastructure for the project.

Purpose
  • Host the Ubuntu environment.
  • Host Kali Linux.
  • Support controlled laboratory networking.
  • Separate testing from the host environment.

Process

STEP 01

Prepare the Isolated GitLab Security Environment

  • Create an isolated cybersecurity laboratory using VirtualBox.
  • Configure Ubuntu as the GitLab and machine-learning host.
  • Configure Kali Linux as the security-testing system.
  • Establish controlled network communication between the intended laboratory components.
  • Verify communication between the virtual machines.
  • Confirm that the assessment is restricted to the authorized laboratory.
  • Check the available system resources for GitLab and model training.
Tools: VirtualBox + Ubuntu + Kali Linux
STEP 02

Deploy GitLab Community Edition

  • Deploy GitLab Community Edition in the Ubuntu laboratory environment.
  • Configure the GitLab repository and project.
  • Enable the required CI/CD functionality.
  • Configure the required runner and execution components.
  • Verify that the GitLab interface is accessible.
  • Confirm that repository operations are functional.
  • Record the initial GitLab configuration.
Tools: GitLab Community Edition + Ubuntu + Docker Engine
STEP 03

Create the GitLab CI/CD Pipeline

  • Create a test repository for the controlled application.
  • Create the .gitlab-ci.yml configuration.
  • Define representative pipeline stages and jobs.
  • Include the intended validation, testing, and security-check stages.
  • Commit the initial configuration to Git.
  • Execute the approved pipeline.
  • Record the initial configuration and pipeline status.
Tools: GitLab + Git + Ubuntu
STEP 04

Establish the Trusted Configuration Baseline

  • Review the initial .gitlab-ci.yml configuration.
  • Verify the intended jobs, commands, stages, and execution rules.
  • Commit the approved configuration to Git.
  • Calculate the SHA-256 hash of the trusted configuration.
  • Store the baseline hash for later comparison.
  • Record the approved configuration and its integrity information.
Tools: Git + Python hashlib + GitLab
STEP 05

Collect and Inspect the Public Dataset

  • Identify a suitable public cybersecurity dataset containing relevant labelled records.
  • Obtain the dataset from its legitimate public source.
  • Load the dataset into the Python environment.
  • Inspect the available features, target labels, and data types.
  • Review missing values, duplicate records, and class distribution.
  • Verify that the available features and labels support the intended classification task.
  • Check whether the training features can be meaningfully mapped to the GitLab configuration-analysis workflow.
  • Record dataset limitations before model development.
Tools: Python + Pandas + NumPy
STEP 06

Preprocess the Dataset and Prepare Features

  • Clean the collected dataset and handle missing or invalid values.
  • Separate the target labels from the input features
  • Remove irrelevant fields and identify potential data leakage
  • Transform categorical or textual fields where required.
  • Select relevant features for the intended classification task.
  • Define the feature representation required for LightGBM.
  • Analyse the GitLab YAML configuration to identify compatible candidate change features.
  • Confirm that the dataset features and configuration-analysis inputs can be represented consistently.
Tools: Python + Pandas + NumPy + PyYAML + Git
STEP 07

Split the Dataset into Training and Testing Sets

  • Divide the prepared dataset into training and testing sets.
  • Use a suitable splitting strategy for the available labelled data.
  • Apply stratified splitting where appropriate to preserve class distribution.
  • Keep the testing set separate from model training.
  • Avoid using testing data to make training or feature-selection decisions.
  • Record the dataset sizes and splitting strategy.
  • Prepare the separate datasets for model training and evaluation.
Tools: Python + scikit-learn + Pandas
STEP 08

Train and Evaluate the LightGBM Model

  • Train the LightGBM model using the prepared training dataset.
  • Use the corresponding target labels during training.
  • Generate predictions for the separate testing dataset.
  • Calculate suitable classification metrics.
  • Review precision, recall, F1-score, and the confusion matrix where applicable.
  • Examine false positives and false negatives.
  • Record the model's performance and limitations.
  • Save the trained model and required preprocessing configuration for integration.
Tools: Python + LightGBM + scikit-learn + Pandas
STEP 09

Integrate the Model with GitLab Configuration Analysis

  • Load the trained LightGBM model into the Python analysis workflow.
  • Read the GitLab .gitlab-ci.yml configuration.
  • Use Git to retrieve the relevant configuration changes.
  • Parse the YAML configuration using PyYAML.
  • Extract the configuration-change features defined for the model.
  • Apply the required preprocessing and feature transformations.
  • Verify that the extracted feature representation matches the model's expected input
  • Generate and record the model prediction for the configuration-change record.
Tools: GitLab + Git + Python + PyYAML + LightGBM
STEP 10

Perform the Controlled Configuration Modification Assessment

  • Use the approved pipeline configuration as the trusted baseline.
  • Prepare a separate working copy for controlled testing.
  • Introduce a harmless, controlled suspicious modification to the .gitlab-ci.yml file.
  • Include representative test cases such as unexpected job-command changes or removal of a configured security-check stage.
  • Keep the test cases separate from the dataset used for initial model evaluation.
  • Analyse the modified configuration using the integrated workflow.
  • Record the extracted features and LightGBM prediction.
  • Preserve the evidence for subsequent validation.
Tools: GitLab + Git + Python + PyYAML + LightGBM
STEP 11

Validate and Correlate Security Findings

  • Review the LightGBM classification results.
  • Review the Git diff results.
  • Review the SHA-256 integrity-check results.
  • Review the modified YAML configuration.
  • Review relevant Semgrep CE findings.
  • Review relevant Trivy findings.
  • Compare the available evidence against the approved pipeline configuration.
  • Confirm which findings require further investigation and which are technically applicable.
Tools: LightGBM + Git + Python hashlib + PyYAML + Semgrep CE + Trivy
STEP 12

Document the Security Finding

  • Create a security assessment record for the GitLab CI/CD pipeline.
  • Record the GitLab project as the affected asset.
  • Document the unauthorized pipeline configuration modification finding.
  • Identify the affected .gitlab-ci.yml elements.
  • Add the relevant Git diff evidence.
  • Record the LightGBM prediction and its limitations.
  • Add the SHA-256 integrity-verification evidence.
  • Document the potential security impact and recommended remediation.
Tools: GitLab + Git + Python + Streamlit
STEP 13

Perform Risk-Based Prioritization

  • Review the validated pipeline configuration finding.
  • Identify the affected pipeline jobs and stages.
  • Evaluate whether security checks or execution restrictions have been altered.
  • Consider the impact of the modified commands and configuration settings.
  • Review the permissions available to the affected pipeline and runner.
  • Consider the potential impact on build integrity and software delivery.
  • Determine the remediation priority using documented criteria.
  • Record the risk assessment and supporting evidence.
Tools: GitLab + Git + Python + Streamlit
STEP 14

Develop the Pipeline Configuration Remediation Strategy

  • Review the prioritized configuration finding.
  • Identify the approved configuration that must be restored or corrected.
  • Determine which pipeline changes are authorized.
  • Define the required job commands and security-check stages.
  • Identify the appropriate protected-branch and merge-request controls.
  • Determine which pipeline execution restrictions are required.
  • Document the remediation actions.
  • Define the post-remediation validation requirements.
Tools: GitLab + Git + Python
STEP 15

Harden GitLab Pipeline Configuration Access

  • Configure suitable protected branches where supported.
  • Configure merge-request approvals for the intended workflow.
  • Restrict who can modify protected pipeline configurations.
  • Ensure that changes to security-related pipeline stages receive the required review.
  • Apply the intended pipeline execution restrictions.
  • Verify that the access controls are configured correctly.
  • Confirm that authorized users can continue managing approved pipeline changes.
Tools: GitLab Community Edition + Git
STEP 16

Perform Post-Remediation Configuration Testing

  • Restore or correct the suspicious pipeline configuration changes.
  • Commit the corrected configuration to Git.
  • Reanalyse the corrected .gitlab-ci.yml file using PyYAML.
  • Recalculate the SHA-256 hash and compare it with the expected approved configuration.
  • Repeat the Git change analysis.
  • Run the relevant security checks again.
  • Verify that the corrected pipeline configuration contains the intended jobs and security stages.
  • Preserve the post-remediation evidence.
Tools: GitLab + Git + Python hashlib + PyYAML + Semgrep CE + Trivy
STEP 17

Validate Legitimate Pipeline Operations

  • Execute the approved pipeline using the corrected configuration.
  • Verify that the intended pipeline stages and jobs operate correctly.
  • Confirm that the configured security checks continue to execute.
  • Verify that legitimate configuration changes can proceed through the required review process.
  • Check that unauthorized changes remain subject to the intended restrictions.
  • Review the model prediction and integrity-check results for the corrected configuration.
  • Record the final pipeline execution and validation evidence.
Tools: GitLab + Git + Python + LightGBM
STEP 18

Perform Final Security Validation and Review

  • Review the original trusted pipeline configuration.
  • Review the controlled modification test cases and their known labels.
  • Review the LightGBM model's evaluation metrics on the separate dataset testing set.
  • Compare the model predictions with the controlled configuration-change assessment results.
  • Review the SHA-256 integrity-verification results.
  • Review the security-rule and supplementary scanning findings.
  • Verify that pipeline access restrictions and remediation procedures operate as intended.
  • Confirm that legitimate pipeline operations remain functional.
  • Document false positives, false negatives, dataset limitations, and remaining risks.
  • Finalize the security assessment and recommendations.
Tools: GitLab + Git + Python + LightGBM + scikit-learn + Streamlit

Outcome

A GitLab CI/CD environment is deployed in an isolated Ubuntu laboratory to assess unauthorized pipeline configuration modifications.

A trusted .gitlab-ci.yml configuration is established in Git, and its SHA-256 hash is recorded as the baseline for integrity verification.

A suitable public cybersecurity dataset is collected and preprocessed to prepare the labelled records required for LightGBM model training and evaluation. Dataset suitability, feature relevance, and label availability are reviewed before model training.

The LightGBM model is trained using the prepared training data and evaluated using a separate testing set. Appropriate evaluation metrics are recorded to assess classification performance and identify potential false positives and false negatives.

Python and PyYAML are used to analyse GitLab pipeline configuration files and extract relevant features from configuration changes. The feature representation is aligned with the model's training inputs so that predictions are based on compatible data.

Controlled pipeline configuration modifications are introduced in the isolated laboratory. Git change analysis identifies the modified configuration elements, while LightGBM classifies compatible extracted features to identify suspicious patterns requiring investigation.

SHA-256 integrity verification identifies differences between the current pipeline configuration and the trusted baseline. Git history and security-rule validation provide additional evidence for determining whether the changes are expected or require further investigation.

GitLab project controls are configured to restrict unapproved changes where supported. Suspicious modifications are reviewed, corrected or reverted, and tested again to verify that the intended pipeline configuration and security checks are restored.

A Streamlit dashboard presents model predictions, configuration-change information, integrity status, and security assessment findings. The final results document model performance, controlled test outcomes, remediation evidence, and remaining limitations.

The completed use case demonstrates a combined approach to dataset-based LightGBM classification, GitLab CI/CD configuration analysis, SHA-256 integrity verification, and controlled pipeline protection. The model's effectiveness against GitLab configuration attacks is established through controlled testing rather than assumed from dataset evaluation alone.