Research Area:  Machine Learning

Abstract:

Brain age estimation is clinically important as it can provide valuable information in the context of neurodegenerative diseases such as Alzheimers. Population graphs, which include multimodal imaging information of the subjects along with the relationships among the population, have been used in literature along with Graph Convolutional Networks (GCNs) and have proved beneficial for a variety of medical imaging tasks. A population graph is usually static and constructed manually using non-imaging information. However, graph construction is not a trivial task and might significantly affect the performance of the GCN, which is inherently very sensitive to the graph structure. In this work, we propose a framework that learns a population graph structure optimized for the downstream task. An attention mechanism assigns weights to a set of imaging and non-imaging features (phenotypes), which are then used for edge extraction. The resulting graph is used to train the GCN. The entire pipeline can be trained end-to-end. Additionally, by visualizing the attention weights that were the most important for the graph construction, we increase the interpretability of the graph. We use the UK Biobank, which provides a large variety of neuroimaging and non-imaging phenotypes, to evaluate our method on brain age regression and classification. The proposed method outperforms competing static graph approaches and other state-of-the-art adaptive methods. We further show that the assigned attention scores indicate that there are both imaging and non-imaging phenotypes that are informative for brain age estimation and are in agreement with the relevant literature.

Keywords:  
Brain
Population
Graph Convolutional Networks
Medical Imaging
Regression
Classification

Author(s) Name:  Kyriaki-Margarita Bintsi, Vasileios Baltatzis, Rolandos Alexandros Potamias, Alexander Hammers & Daniel Rueckert

Publisher name:  Springer

DOI:  https://doi.org/10.1007/978-3-031-43993-3_19

Volume Information:  Volume 14227

Paper Link:   https://link.springer.com/chapter/10.1007/978-3-031-43993-3_19