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Mutual Information Estimation Projects using Python

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Python Projects in Mutual Information Estimation for Masters and PhD

    Project Background:
    The project on mutual information estimation explores relationships and dependencies between variables within complex datasets. Mutual information is crucial to quantify the shared information or entropy between variables. By estimating mutual information, it aims to unveil hidden patterns, correlations, or dependencies within the data. This process involves analyzing different data sources and extracting insights about how changes in one variable relate to or impact changes in another. It utilizes advanced statistical and computational techniques, including information theory principles and potentially machine learning algorithms, to accurately estimate mutual information. Such estimations play a vital role in diverse fields, such as feature selection, dimensionality reduction, and understanding the structure of complex systems.

    Problem Statement

  • This project revolves around accurately quantifying the level of interdependence and shared information between variables within complex datasets.
  • The challenge in mutual information estimation lies in devising robust methods to effectively estimate mutual information in scenarios where the data might be high-dimensional, noisy, or nonlinear.
  • Precision estimating mutual information is crucial for various applications, such as feature selection in machine learning, clustering, and understanding complex systems.
  • The core issues involve developing estimation techniques resilient to data imperfections ensuring scalability to handle large datasets for nonlinear relationships or high-dimensional spaces.
  • Moreover, achieving efficient estimation methods that are computationally viable for real-world applications is a key challenge within this problem space.
  • The goal is to create reliable and adaptable methods that accurately capture the interdependencies and shared information between variables, aiding in enhanced data-driven decision-making across different domains.
  • Aim and Objectives

  • To develop accurate and scalable methods for estimating mutual information and uncovering relationships and dependencies within complex datasets.
  • Create robust algorithms that accurately estimate mutual information, accounting for high-dimensionality and nonlinear relationships.
  • Ensure the methods can handle large datasets efficiently, maintaining accuracy in mutual information estimation.
  • Design methods adaptable across various domains, from feature selection in machine learning to understanding complex systems in diverse fields.
  • Develop resilient techniques for noisy data and capture nonlinear relationships between variables.
  • Types of Mutual Information Estimation

  • Histogram-based Mutual Information Estimation
  • Kernel Density Estimation for Mutual Information
  • Entropy-based Mutual Information Estimation
  • K-nearest Neighbor Mutual Information Estimation
  • Copula-based Mutual Information Estimation
  • Nonparametric Mutual Information Estimation
  • Gaussian Copula Mutual Information Estimation
  • Information Theoretic Neural Estimation of Mutual Information
  • Binning-based Mutual Information Estimation
  • Distance Correlation Mutual Information Estimation
  • Contributions to Mutual Information Estimation

    1. Accurate estimation provides deeper insights into the relationships between variables, facilitating a better understanding of complex data structures and interdependencies.
    2. Precise mutual information estimation aids in identifying and selecting the most relevant features for machine learning model performance and interpretability.
    3. Assists in clustering similar data points and improving classification accuracy by understanding the relationships between variables.
    4. Estimation techniques offer valuable insights into complex systems, such as biological networks, financial markets, and social interactions, shedding light on underlying relationships and dependencies.
    5. Accurate estimation supports data-driven decision-making in various fields by clarifying the interactions and influences between different variables.

    Applications of Mutual Information Estimation

  • Feature Selection
  • Dimensionality Reduction
  • Clustering
  • Variable Independence Testing
  • Information Retrieval
  • Entropy Estimation
  • Bioinformatics
  • Performance Metrics

  • Jensen-Shannon Divergence
  • Kullback-Leibler Divergence
  • Squared Error
  • Accuracy
  • Precision
  • Recall
  • F1 Score
  • Mean Squared Error (MSE)
  • Root Mean Squared Error (RMSE)
  • Area Under the Curve (AUC)
  • Software Tools and Technologies

    Operating System: Ubuntu 18.04 LTS 64bit / Windows 10
    Development Tools: Anaconda3, Spyder 5.0, Jupyter Notebook
    Language Version: Python 3.9
    Python Libraries:
    1. Python ML Libraries:

  • Scikit-Learn
  • Numpy
  • Pandas
  • Matplotlib
  • Seaborn
  • Docker
  • MLflow

  • 2. Deep Learning Frameworks:
  • Keras
  • TensorFlow
  • PyTorch